Modeling biological systems in stochastic concurrent constraint programming Journal Article
In: Constraints, vol. 13, no. 1, pp. 66–90, 2008.
On the approximation of stochastic concurrent constraint programming by master equation Journal Article
In: Electronic Notes in Theoretical Computer Science, vol. 220, no. 3, pp. 163–180, 2008.
Agent-based protein structure prediction Journal Article
In: Multiagent and Grid Systems, vol. 3, no. 2, pp. 183–197, 2007.
Constraint-based approaches to stochastic dynamics of biological systems Journal Article
In: University of Udine PhD Thesis Series, CS2007/1, 2007.
Constraint-based simulation of biological systems described by molecular interaction maps Inproceedings
In: 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007), pp. 288–293, IEEE 2007.
Hamming-like distances for ill-defined strings in linguistic classification Journal Article
In: 2007.
Maximum possibility vs. maximum likelihood decisions Journal Article
In: LINZ, pp. 12, 2007.
Scoring predictive models using a reduced representation of proteins: model and energy definition Journal Article
In: BMC Structural Biology, vol. 7, no. 1, pp. 1–17, 2007.
Stochastic concurrent constraint programming and differential equations Journal Article
In: Electronic Notes in Theoretical Computer Science, vol. 190, no. 3, pp. 27–42, 2007.
Relating stochastic process algebras and differential equations for biological modeling Journal Article
In: Proceedings of PASTA, vol. 2006, 2006.
Channel Models for DNA Word Design Inproceedings
In: Communications to SIMAI Congress, 2006.
Codeword distinguishability in minimum diversity decoding Journal Article
In: Journal of Discrete Mathematical Sciences and Cryptography, vol. 9, no. 3, pp. 487–502, 2006.
Connecting process algebras and differential equations for Systems Biology Inproceedings
In: 6th Workshop on Process Algebras and Stochastically Timed Activities (PASTA), 2006.
Fuzzy codebooks for DNA word design Journal Article
In: at IPMU-2006, Paris, France, 2006.
Possibilistic channels for DNA word design Incollection
In: Soft Methods for Integrated Uncertainty Modelling, pp. 327–335, Springer, Berlin, Heidelberg, 2006.
Stochastic concurrent constraint programming Journal Article
In: Electronic Notes in Theoretical Computer Science, vol. 164, no. 3, pp. 65–80, 2006.
BuST-Bundled Suffix Trees Inproceedings
In: Fourth IFIP International Conference on Theoretical Computer Science-TCS 2006, pp. 91–102, Springer, Boston, MA 2006.
A distributed and probabilistic concurrent constraint programming language Inproceedings
In: International Conference on Logic Programming, pp. 143–158, Springer, Berlin, Heidelberg 2005.
Bundled suffix trees Inproceedings
In: Annual meeting of the Bioinformatics Italian Society, pp. n–d, Societ`a Italiana di Bioinformatica 2005.
Concurrent methodologies for global optimization Inproceedings
In: International Conference on Logic Programming, pp. 441–443, Springer, Berlin, Heidelberg 2005.